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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900640.1_cds_XP_016450644.1_45073
CDS Infomation

[gene=LOC107775429] [db_xref=GeneID:107775429] [protein=cysteine proteinase 3-like] [protein_id=XP_016450644.1] [location=join(919..1115,1252..1373,1735..1850,2472..2545,2744..3008,3261..3392,4008..4143,4444..4481)] [gbkey=CDS]
Sequence

ATGACTCGGGCCTTGATAATACTATTACTCATCGCGACCTTAATCGCCGCCGCACGAGGC
GGAGCGTTGACGTTTGACGATGATAATCCGATCAGGCAAGTTGTAGTATCCGACGGTTTG
CAGGAGCTGGAGAGTGGAATTCTCCAAGTCATCGGCCAAACGCGCCGTGCTCTCTCCTTC
GTTCGCTTTGTTCGCAGGTATGGGAAGAGATACGAGTCAGTTGAGGAGATCAAGCAAAGG
TTTGAGATATACTTGGACAATCTGAAGATGATTAGGTCTCACAACAAGCAACGACTTTCC
TACAAACTTGGTGTCAATGAGTTTACCGACCTAACATGGGATGAGTTTAGGAGAGAAAGG
CTAGGAGCTCCTCAAAACTGTTCCGCTACCACAAAGAGCGATTTTCAGCTCACTAATGTC
AACCTACCAGAGACGAAAGACTGGAGGGAAGCACGGATAGTAAGCCCAGTGAAGAAGCAG
GGGAAGTGCGGGTCTTGCTGGACATTCAGCACTACTGGTGCTCTGGAGGCAGCATATGCC
CAGGCATTTGGGAAGAACATCTCTCTGTCTGAACAGCAGCTCTTGGACTGTGCTGGAGCT
TTTAATAACTTTGGATGCCATGGCGGGCTTCCATCACAGGCTTTTGAGTACATTAAATAC
AGTGGTGGTCTTGACACTGAAGAAGAATATCCTTATGCTGGAAAGGCTGGTGTATGCAAA
TTTTCGTCAGAAAATGTTGCTGTTAAAGTCGTTGATTCTGTTAATATTACCAAGGGTGCT
GAAGATGAACTAAAATACGCGGTTGCATTTATTAGACCGGTTAGTGTAGCTTATCAGGTG
GTAAAAGGTTTCAAACAGTACAAGGGTGGAATTTACAGCAGCACCGTATGTGGCAACACT
CCCCAAGATGTGAACCATGCTGTTCTTGCTGTGGGATATGGTGTTGAAAATGGTACTCCA
TATTGGCTGATCAAGAACTCATGGGGAGCTGAATGGGGTGACAATGGATACTTCAAAATG
GAGATGGGAAAGAACATGTGTGGTATTGCAACTTGCGCATCATACCCTATTGTTGCTTGA

Peptide Sequence

PEP ID

XP_016450644.1
PEP Infomation

PREDICTED: cysteine proteinase 3-like [Nicotiana tabacum]
Sequence

MTRALIILLLIATLIAAARGGALTFDDDNPIRQVVVSDGLQELESGILQVIGQTRRALSF
VRFVRRYGKRYESVEEIKQRFEIYLDNLKMIRSHNKQRLSYKLGVNEFTDLTWDEFRRER
LGAPQNCSATTKSDFQLTNVNLPETKDWREARIVSPVKKQGKCGSCWTFSTTGALEAAYA
QAFGKNISLSEQQLLDCAGAFNNFGCHGGLPSQAFEYIKYSGGLDTEEEYPYAGKAGVCK
FSSENVAVKVVDSVNITKGAEDELKYAVAFIRPVSVAYQVVKGFKQYKGGIYSSTVCGNT
PQDVNHAVLAVGYGVENGTPYWLIKNSWGAEWGDNGYFKMEMGKNMCGIATCASYPIVA

Transcript Sequence

Gene sequence data has not been registered.